ROBOT Report - zp

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Types of errors

LevelNumber of errors
ERROR19
WARN33749

Error breakdown

RuleNumber of errors
misused_obsolete_label14
missing_ontology_description1
duplicate_label2
missing_ontology_license1
missing_ontology_title1
missing_definition1
missing_obsolete_label23
missing_xrefs33725

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Row Level Rule Name Subject Property Value
1 ERROR misused_obsolete_label obsolete cell retina decreased amount, abnormal rdfs:label obsolete cell retina decreased amount, abnormal
2 ERROR misused_obsolete_label obsolete cytoskeletal anchoring at plasma membrane decreased process quality, abnormal rdfs:label obsolete cytoskeletal anchoring at plasma membrane decreased process quality, abnormal
3 ERROR misused_obsolete_label obsolete cell retinal inner nuclear layer decreased amount, abnormal rdfs:label obsolete cell retinal inner nuclear layer decreased amount, abnormal
4 ERROR misused_obsolete_label obsolete cytoskeletal anchoring at plasma membrane increased process quality, abnormal rdfs:label obsolete cytoskeletal anchoring at plasma membrane increased process quality, abnormal
5 ERROR misused_obsolete_label obsolete cell head apoptotic, abnormal rdfs:label obsolete cell head apoptotic, abnormal
6 ERROR misused_obsolete_label obsolete cell EVL morphology, abnormal rdfs:label obsolete cell EVL morphology, abnormal
7 ERROR misused_obsolete_label obsolete cell parapineal organ mislocalised, abnormal rdfs:label obsolete cell parapineal organ mislocalised, abnormal
8 ERROR misused_obsolete_label obsolete cell retinal pigmented epithelium morphology, abnormal rdfs:label obsolete cell retinal pigmented epithelium morphology, abnormal
9 ERROR misused_obsolete_label obsolete cell forerunner cell group decreased amount, abnormal rdfs:label obsolete cell forerunner cell group decreased amount, abnormal
10 ERROR misused_obsolete_label obsolete multi-organism behaviormulti-organism behavior process quality, abnormal rdfs:label obsolete multi-organism behaviormulti-organism behavior process quality, abnormal
11 ERROR misused_obsolete_label obsolete cell epicardium spatial pattern, abnormal rdfs:label obsolete cell epicardium spatial pattern, abnormal
12 ERROR misused_obsolete_label obsolete plasma membrane part of cell junction compact layer of ventricle oblique orientation, abnormal rdfs:label obsolete plasma membrane part of cell junction compact layer of ventricle oblique orientation, abnormal
13 ERROR misused_obsolete_label obsolete cell lens disorganized, abnormal rdfs:label obsolete cell lens disorganized, abnormal
14 ERROR misused_obsolete_label obsolete cell notochord cuboid, abnormal rdfs:label obsolete cell notochord cuboid, abnormal
15 ERROR missing_ontology_description obo:zp.owl dc11:description
16 ERROR duplicate_label hair cell anterior macula decreased amount, abnormal rdfs:label hair cell anterior macula decreased amount, abnormal
17 ERROR duplicate_label hair cell anterior macula decreased amount, abnormal rdfs:label hair cell anterior macula decreased amount, abnormal
18 ERROR missing_ontology_license obo:zp.owl dc:license
19 ERROR missing_ontology_title obo:zp.owl dc11:title
20 WARN missing_definition Zebrafish Phenotype IAO:0000115
21 WARN missing_obsolete_label 0-0-ZFA:0009091-PATO:0002269-BSPO:0000099-BFO:0000050-ZFA:0000051 rdfs:label <0-0-ZFA:0009091-PATO:0002269-BSPO:0000099-BFO:0000050-ZFA:0000051>
22 WARN missing_obsolete_label 0-0-ZFA:0000152-PATO:0002463-BSPO:0000099-BFO:0000050-ZFA:0000107 rdfs:label <0-0-ZFA:0000152-PATO:0002463-BSPO:0000099-BFO:0000050-ZFA:0000107>
23 WARN missing_obsolete_label BSPO:0000120-BFO:0000050-ZFA:0000121-PATO:0000462-0-0-0 rdfs:label
24 WARN missing_obsolete_label BSPO:0000121-BFO:0000050-ZFA:0000121-PATO:0000628-0-0-0 rdfs:label
25 WARN missing_obsolete_label 0-0-ZFA:0009199-PATO:0002168-BSPO:0000098-BFO:0000050-ZFA:0001559 rdfs:label <0-0-ZFA:0009199-PATO:0002168-BSPO:0000098-BFO:0000050-ZFA:0001559>
26 WARN missing_obsolete_label 0-0-ZFA:0009199-PATO:0002168-BSPO:0000099-BFO:0000050-ZFA:0000076 rdfs:label <0-0-ZFA:0009199-PATO:0002168-BSPO:0000099-BFO:0000050-ZFA:0000076>
27 WARN missing_obsolete_label BSPO:0000121-BFO:0000050-ZFA:0001076-PATO:0000628-0-0-0 rdfs:label
28 WARN missing_obsolete_label BSPO:0000120-BFO:0000050-ZFA:0001076-PATO:0000628-0-0-0 rdfs:label
29 WARN missing_obsolete_label BSPO:0000121-BFO:0000050-ZFA:0001323-PATO:0000462-0-0-0 rdfs:label
30 WARN missing_obsolete_label BSPO:0000120-BFO:0000050-ZFA:0001323-PATO:0000462-0-0-0 rdfs:label
31 WARN missing_obsolete_label 0-0-ZFA:0009077-PATO:0002269-BSPO:0000096-BFO:0000050-ZFA:0000445 rdfs:label <0-0-ZFA:0009077-PATO:0002269-BSPO:0000096-BFO:0000050-ZFA:0000445>
32 WARN missing_obsolete_label obsolete pronephric duct occurrence autophagy, abnormal rdfs:label intersegmental vessel abnormal, abnormal
33 WARN missing_obsolete_label obsolete pronephric duct spatial pattern, abnormal rdfs:label lateral line abnormal, abnormal
34 WARN missing_obsolete_label mechanosensory behavior abnormal, abnormal rdfs:label mechanosensory behavior abnormal, abnormal
35 WARN missing_obsolete_label neuromuscular junction development abnormal, abnormal rdfs:label neuromuscular junction development abnormal, abnormal
36 WARN missing_obsolete_label obsolete nucleus erythroblast size, abnormal rdfs:label epithelial cell pronephros abnormal, abnormal
37 WARN missing_obsolete_label http://purl.obolibrary.org/obo/GO_0008003 epidermis absent, abnormal rdfs:label
38 WARN missing_obsolete_label http://purl.obolibrary.org/obo/GO_0031513 neuromast hair cell absent, abnormal rdfs:label
39 WARN missing_obsolete_label http://purl.obolibrary.org/obo/GO_0005605 notochord absent, abnormal rdfs:label
40 WARN missing_obsolete_label http://purl.obolibrary.org/obo/GO_0031512 Kupffer's vesicle increased length, abnormal rdfs:label
41 WARN missing_obsolete_label obsolete retinal inner nuclear layer amount, abnormal rdfs:label Z disc cardiac muscle cell increased length, abnormal
42 WARN missing_obsolete_label obsolete retinal outer nuclear layer amount, abnormal rdfs:label
43 WARN missing_obsolete_label BSPO:0000120-BFO:0000050-ZFA:0000101-PATO:0000462-0-0-0 rdfs:label
44 WARN missing_xrefs Zebrafish Phenotype oboInOwl:hasDbXref
45 WARN missing_xrefs somitogenesis disrupted, abnormal oboInOwl:hasDbXref
46 WARN missing_xrefs somite specification disrupted, abnormal oboInOwl:hasDbXref
47 WARN missing_xrefs determination of left/right asymmetry in lateral mesoderm disrupted, abnormal oboInOwl:hasDbXref
48 WARN missing_xrefs ectoderm development disrupted, abnormal oboInOwl:hasDbXref
49 WARN missing_xrefs lateral mesoderm development disrupted, abnormal oboInOwl:hasDbXref
50 WARN missing_xrefs blood vessel morphogenesis disrupted, abnormal oboInOwl:hasDbXref
51 WARN missing_xrefs hematopoietic stem cell differentiation disrupted, abnormal oboInOwl:hasDbXref
52 WARN missing_xrefs blood decreased amount, abnormal oboInOwl:hasDbXref
53 WARN missing_xrefs somite border somite 5 amorphous, abnormal oboInOwl:hasDbXref
54 WARN missing_xrefs somite quality, abnormal oboInOwl:hasDbXref
55 WARN missing_xrefs somite morphology, abnormal oboInOwl:hasDbXref
56 WARN missing_xrefs somite shape, abnormal oboInOwl:hasDbXref
57 WARN missing_xrefs somite border somite 7 amorphous, abnormal oboInOwl:hasDbXref
58 WARN missing_xrefs somite border somite 8 amorphous, abnormal oboInOwl:hasDbXref
59 WARN missing_xrefs somite border somite 6 amorphous, abnormal oboInOwl:hasDbXref
60 WARN missing_xrefs somite border somite 9 amorphous, abnormal oboInOwl:hasDbXref
61 WARN missing_xrefs post-vent region quality, abnormal oboInOwl:hasDbXref
62 WARN missing_xrefs intersegmental vessel malformed, abnormal oboInOwl:hasDbXref
63 WARN missing_xrefs somite border irregular spatial pattern, abnormal oboInOwl:hasDbXref
64 WARN missing_xrefs somite border deformed, abnormal oboInOwl:hasDbXref
65 WARN missing_xrefs hematopoietic stem cell decreased amount, abnormal oboInOwl:hasDbXref
66 WARN missing_xrefs hindbrain morphology, abnormal oboInOwl:hasDbXref
67 WARN missing_xrefs motor neuron spinal cord decreased amount, abnormal oboInOwl:hasDbXref
68 WARN missing_xrefs spinal cord interneuron decreased amount, abnormal oboInOwl:hasDbXref
69 WARN missing_xrefs trunk decreased length, abnormal oboInOwl:hasDbXref
70 WARN missing_xrefs post-vent region decreased length, abnormal oboInOwl:hasDbXref
71 WARN missing_xrefs endoderm development disrupted, abnormal oboInOwl:hasDbXref
72 WARN missing_xrefs retinal ganglion cell axon guidance disrupted, abnormal oboInOwl:hasDbXref
73 WARN missing_xrefs skeletal muscle fiber development disrupted, abnormal oboInOwl:hasDbXref
74 WARN missing_xrefs swim bladder inflation arrested, abnormal oboInOwl:hasDbXref
75 WARN missing_xrefs brain quality, abnormal oboInOwl:hasDbXref
76 WARN missing_xrefs endoderm morphology, abnormal oboInOwl:hasDbXref
77 WARN missing_xrefs hindbrain quality, abnormal oboInOwl:hasDbXref
78 WARN missing_xrefs midbrain hindbrain boundary malformed, abnormal oboInOwl:hasDbXref
79 WARN missing_xrefs neural crest quality, abnormal oboInOwl:hasDbXref
80 WARN missing_xrefs retinal neural layer lacks all parts of type ventral region retinal photoreceptor layer, abnormal oboInOwl:hasDbXref
81 WARN missing_xrefs pericardium edematous, abnormal oboInOwl:hasDbXref
82 WARN missing_xrefs swim bladder physical object quality, abnormal oboInOwl:hasDbXref
83 WARN missing_xrefs yolk quality, abnormal oboInOwl:hasDbXref
84 WARN missing_xrefs pharyngeal arch 3-7 skeleton quality, abnormal oboInOwl:hasDbXref
85 WARN missing_xrefs cerebellum malformed, abnormal oboInOwl:hasDbXref
86 WARN missing_xrefs eye decreased size, abnormal oboInOwl:hasDbXref
87 WARN missing_xrefs heart quality, abnormal oboInOwl:hasDbXref
88 WARN missing_xrefs liver mislocalised anteriorly, abnormal oboInOwl:hasDbXref
89 WARN missing_xrefs pectoral fin bud aplastic, abnormal oboInOwl:hasDbXref
90 WARN missing_xrefs retinal photoreceptor layer disorganized, abnormal oboInOwl:hasDbXref
91 WARN missing_xrefs retina morphology, abnormal oboInOwl:hasDbXref
92 WARN missing_xrefs surface structure quality, abnormal oboInOwl:hasDbXref
93 WARN missing_xrefs optic tectum decreased size, abnormal oboInOwl:hasDbXref
94 WARN missing_xrefs optic tectum disorganized, abnormal oboInOwl:hasDbXref
95 WARN missing_xrefs optic primordium morphology, abnormal oboInOwl:hasDbXref
96 WARN missing_xrefs RoL2 rhombomere 4 mislocalised, abnormal oboInOwl:hasDbXref
97 WARN missing_xrefs head decreased size, abnormal oboInOwl:hasDbXref
98 WARN missing_xrefs pectoral fin quality, abnormal oboInOwl:hasDbXref
99 WARN missing_xrefs pectoral fin aplastic, abnormal oboInOwl:hasDbXref
100 WARN missing_xrefs Meckel's cartilage decreased size, abnormal oboInOwl:hasDbXref
101 WARN missing_xrefs Meckel's cartilage fused with ceratohyal cartilage, abnormal oboInOwl:hasDbXref
102 WARN missing_xrefs exocrine pancreas mislocalised anteriorly, abnormal oboInOwl:hasDbXref
103 WARN missing_xrefs endocrine pancreas mislocalised anteriorly, abnormal oboInOwl:hasDbXref
104 WARN missing_xrefs fin bud aplastic, abnormal oboInOwl:hasDbXref
105 WARN missing_xrefs palatoquadrate cartilage decreased size, abnormal oboInOwl:hasDbXref
106 WARN missing_xrefs palatoquadrate cartilage fused with hyosymplectic cartilage, abnormal oboInOwl:hasDbXref
107 WARN missing_xrefs ceratohyal cartilage decreased size, abnormal oboInOwl:hasDbXref
108 WARN missing_xrefs hyosymplectic cartilage decreased size, abnormal oboInOwl:hasDbXref
109 WARN missing_xrefs ceratobranchial cartilage absent, abnormal oboInOwl:hasDbXref
110 WARN missing_xrefs RoL2 increased amount, abnormal oboInOwl:hasDbXref
111 WARN missing_xrefs Mauthner neuron absent, abnormal oboInOwl:hasDbXref
112 WARN missing_xrefs axon guidance disrupted, abnormal oboInOwl:hasDbXref
113 WARN missing_xrefs olfactory bulb development disrupted, abnormal oboInOwl:hasDbXref
114 WARN missing_xrefs neuromast primordium migration delayed, abnormal oboInOwl:hasDbXref
115 WARN missing_xrefs posterior lateral line nerve development disrupted, abnormal oboInOwl:hasDbXref
116 WARN missing_xrefs innervation disrupted, abnormal oboInOwl:hasDbXref
117 WARN missing_xrefs fasciculation of sensory neuron axon disrupted, abnormal oboInOwl:hasDbXref
118 WARN missing_xrefs olfactory placode disorganized, abnormal oboInOwl:hasDbXref
119 WARN missing_xrefs posterior lateral line nerve decreased length, abnormal oboInOwl:hasDbXref
120 WARN missing_xrefs glomerular layer aplastic, abnormal oboInOwl:hasDbXref
121 WARN missing_xrefs olfactory bulb disorganized, abnormal oboInOwl:hasDbXref
122 WARN missing_xrefs GABAergic neuron olfactory bulb decreased amount, abnormal oboInOwl:hasDbXref
123 WARN missing_xrefs dopaminergic neuron olfactory bulb decreased amount, abnormal oboInOwl:hasDbXref
124 WARN missing_xrefs olfactory epithelium disorganized, abnormal oboInOwl:hasDbXref
125 WARN missing_xrefs olfactory epithelium split, abnormal oboInOwl:hasDbXref
126 WARN missing_xrefs posterior lateral line neuromast malformed, abnormal oboInOwl:hasDbXref
127 WARN missing_xrefs posterior lateral line neuromast decreased amount, abnormal oboInOwl:hasDbXref
128 WARN missing_xrefs posterior lateral line primordium circular, abnormal oboInOwl:hasDbXref
129 WARN missing_xrefs posterior lateral line primordium crescent-shaped, abnormal oboInOwl:hasDbXref
130 WARN missing_xrefs anterior lateral line neuromast decreased amount, abnormal oboInOwl:hasDbXref
131 WARN missing_xrefs olfactory receptor cell spatial pattern, abnormal oboInOwl:hasDbXref
132 WARN missing_xrefs axon olfactory receptor cell decreased length, abnormal oboInOwl:hasDbXref
133 WARN missing_xrefs axon olfactory receptor cell disorganized, abnormal oboInOwl:hasDbXref
134 WARN missing_xrefs neuromast hair cell decreased amount, abnormal oboInOwl:hasDbXref
135 WARN missing_xrefs uroporphyrinogen decarboxylase activity decreased rate, abnormal oboInOwl:hasDbXref
136 WARN missing_xrefs porphyrin-containing compound metabolic process disrupted, abnormal oboInOwl:hasDbXref
137 WARN missing_xrefs blood quality, abnormal oboInOwl:hasDbXref
138 WARN missing_xrefs whole organism lethal (sensu genetics), abnormal oboInOwl:hasDbXref
139 WARN missing_xrefs nucleate erythrocyte fluorescence, abnormal oboInOwl:hasDbXref
140 WARN missing_xrefs endoderm formation process quality, abnormal oboInOwl:hasDbXref
141 WARN missing_xrefs endodermal cell fate specification disrupted, abnormal oboInOwl:hasDbXref
142 WARN missing_xrefs neural plate anterior/posterior regionalization arrested, abnormal oboInOwl:hasDbXref
143 WARN missing_xrefs brain morphology, abnormal oboInOwl:hasDbXref
144 WARN missing_xrefs endodermal cell endoderm decreased amount, abnormal oboInOwl:hasDbXref
145 WARN missing_xrefs yolk increased size, abnormal oboInOwl:hasDbXref
146 WARN missing_xrefs extension decreased length, abnormal oboInOwl:hasDbXref
147 WARN missing_xrefs extension increased thickness, abnormal oboInOwl:hasDbXref
148 WARN missing_xrefs fourth ventricle collapsed, abnormal oboInOwl:hasDbXref
149 WARN missing_xrefs gut aplastic, abnormal oboInOwl:hasDbXref
150 WARN missing_xrefs heart morphology, abnormal oboInOwl:hasDbXref
151 WARN missing_xrefs heart cleft, abnormal oboInOwl:hasDbXref
152 WARN missing_xrefs heart duplicated, abnormal oboInOwl:hasDbXref
153 WARN missing_xrefs notochord aplastic, abnormal oboInOwl:hasDbXref
154 WARN missing_xrefs somite fused with somite, abnormal oboInOwl:hasDbXref
155 WARN missing_xrefs tectal ventricle collapsed, abnormal oboInOwl:hasDbXref
156 WARN missing_xrefs heart tube duplicated, abnormal oboInOwl:hasDbXref
157 WARN missing_xrefs heart tube bifurcated, abnormal oboInOwl:hasDbXref
158 WARN missing_xrefs nervous system quality, abnormal oboInOwl:hasDbXref
159 WARN missing_xrefs anterior-posterior axis whole organism curved ventral, abnormal oboInOwl:hasDbXref
160 WARN missing_xrefs head hypoplastic, abnormal oboInOwl:hasDbXref
161 WARN missing_xrefs forebrain ventricle collapsed, abnormal oboInOwl:hasDbXref
162 WARN missing_xrefs endochondral ossification disrupted, abnormal oboInOwl:hasDbXref
163 WARN missing_xrefs chondrocyte differentiation delayed, abnormal oboInOwl:hasDbXref
164 WARN missing_xrefs eye mislocalised, abnormal oboInOwl:hasDbXref
165 WARN missing_xrefs notochord undulate, abnormal oboInOwl:hasDbXref
166 WARN missing_xrefs mouth absent, abnormal oboInOwl:hasDbXref
167 WARN missing_xrefs head malformed, abnormal oboInOwl:hasDbXref
168 WARN missing_xrefs Meckel's cartilage mislocalised, abnormal oboInOwl:hasDbXref
169 WARN missing_xrefs Meckel's cartilage malformed, abnormal oboInOwl:hasDbXref
170 WARN missing_xrefs ceratobranchial 5 bone composition, abnormal oboInOwl:hasDbXref
171 WARN missing_xrefs pharyngeal arch aplastic, abnormal oboInOwl:hasDbXref
172 WARN missing_xrefs neurocranial trabecula decreased size, abnormal oboInOwl:hasDbXref
173 WARN missing_xrefs neurocranial trabecula malformed, abnormal oboInOwl:hasDbXref
174 WARN missing_xrefs ceratohyal cartilage mislocalised, abnormal oboInOwl:hasDbXref
175 WARN missing_xrefs ceratohyal cartilage malformed, abnormal oboInOwl:hasDbXref
176 WARN missing_xrefs ethmoid cartilage decreased size, abnormal oboInOwl:hasDbXref
177 WARN missing_xrefs cranial cartilage disorganized, abnormal oboInOwl:hasDbXref
178 WARN missing_xrefs pharyngeal arch cartilage disorganized, abnormal oboInOwl:hasDbXref
179 WARN missing_xrefs ceratobranchial cartilage decreased size, abnormal oboInOwl:hasDbXref
180 WARN missing_xrefs perichordal connective tissue morphology, abnormal oboInOwl:hasDbXref
181 WARN missing_xrefs chondrocyte disorganized, abnormal oboInOwl:hasDbXref
182 WARN missing_xrefs gastrulation with mouth forming second quality, abnormal oboInOwl:hasDbXref
183 WARN missing_xrefs gastrulation with mouth forming second disrupted, abnormal oboInOwl:hasDbXref
184 WARN missing_xrefs dorsal/ventral pattern formation disrupted, abnormal oboInOwl:hasDbXref
185 WARN missing_xrefs epidermal cell fate specification disrupted, abnormal oboInOwl:hasDbXref
186 WARN missing_xrefs post-anal tail morphogenesis disrupted, abnormal oboInOwl:hasDbXref
187 WARN missing_xrefs post-anal tail morphogenesis having extra processual parts post-anal tail morphogenesis, abnormal oboInOwl:hasDbXref
188 WARN missing_xrefs tail bud mislocalised posteriorly, abnormal oboInOwl:hasDbXref
189 WARN missing_xrefs heart rudiment unfused from heart rudiment, abnormal oboInOwl:hasDbXref
190 WARN missing_xrefs notochord quality, abnormal oboInOwl:hasDbXref
191 WARN missing_xrefs notochord increased width, abnormal oboInOwl:hasDbXref
192 WARN missing_xrefs otic placode disorganized, abnormal oboInOwl:hasDbXref
193 WARN missing_xrefs otic placode aplastic, abnormal oboInOwl:hasDbXref
194 WARN missing_xrefs pronephric duct hypoplastic, abnormal oboInOwl:hasDbXref
195 WARN missing_xrefs somite circular, abnormal oboInOwl:hasDbXref
196 WARN missing_xrefs somite increased width, abnormal oboInOwl:hasDbXref
197 WARN missing_xrefs paraxial mesoderm morphology, abnormal oboInOwl:hasDbXref
198 WARN missing_xrefs paraxial mesoderm has extra parts of type adaxial cell, abnormal oboInOwl:hasDbXref
199 WARN missing_xrefs anterior-posterior axis paraxial mesoderm decreased length, abnormal oboInOwl:hasDbXref
200 WARN missing_xrefs rhombomere 5 fused with left side right side rhombomere 5, abnormal oboInOwl:hasDbXref