Skip to content

Unified Phenotype Ontology

Using uPheno in Curation

Initializing search

Getting started
Cite
About uPheno
uPheno community effort
How-to guides
Tutorials
Reference
Other Monarch Docs

Unified Phenotype Ontology

Getting started
Cite
About uPheno
uPheno community effort
uPheno community effort
- Meetings
- Outreach
How-to guides
How-to guides
- Standard ODK workflows
  Standard ODK workflows
- Contributing
- Advanced Phenotype Ontology Editor workflows
  Advanced Phenotype Ontology Editor workflows
Tutorials
Tutorials
- Using uPheno in Data Analysis
- Using uPheno in Curation Using uPheno in Curation
  Table of contents
  - Using OBA and uPheno in data curation
  - Training
Reference
Reference
- Core concepts of phenotype data
- Phenotype data in practice
- Integrating phenotype data with the uPheno framework
- EQ modelling
  EQ modelling
- The Phenotype Reconciliation Effort
- Use Cases
- Components
  Components
- Aligning with other ontologies
  Aligning with other ontologies
  - Overview
- Imports
  Imports
  - Overview
  - Gene Ontology
  - Uberon
  - PATO
- Mappings
  Mappings
  - Overview
  - MP-HP
- Quality Control
  Quality Control
  - Overview
  - Standard OBO checks
- Design Patterns
  Design Patterns
  - Design Patterns Overview
Other Monarch Docs

Using uPheno in Curation

Using OBA and uPheno in data curation¶

Authors:

James McLaughlin
Nicolas Matentzoglu

Last update: 27.03.2024.

Training¶

Familiarise yourself with the core concepts
Familiarise the basics of phenotype data

Made with Material for MkDocs