Add custom uPheno Makefile
The custom uPheno Makefile is an extension to your normal custom Makefile (for example, hp.Makefile, mp.Makefile, etc), located in the src/ontology directory of your ODK set up.
To install it:
(1) Open your normal custom Makefile and add a line in the very end:
(2) Now download the custom Makefile:
and save it in your
Feel free to use, for example, wget:
cd src/ontology wget https://raw.githubusercontent.com/obophenotype/upheno/master/src/ontology/config/pheno.Makefile -O pheno.Makefile
From now on you can simply run
sh run.sh make update_pheno_makefile
whenever you wish to synchronise the Makefile with the uPheno repo.
(Note: it would probably be good to add a GitHub action that does that automatically.)