- labels Featured
- Imported ontologies
Currently the imports includes:
To avoid multiple duplicate classes for heart, lung, skin etc we map all classes to [Uberon] where this is applicable. For more divergent species such as fly and C elegans we use the appropriate species-specific ontology.
Currently there are a small number of highly specific classes in FMA that are being used and have no corresponding class in Uberon
We use the OWLAPI SyntacticLocalityModularityExtractor, via [OWLTools]. See the http://purl.obolibrary.org/obo/upheno/Makefile for details